STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72343.13-methyladenine DNA glycosylase. (287 aa)    
Predicted Functional Partners:
ANP72342.1
Haloacid dehalogenase; Pfam:pfam00122 E1-E2 ATPase.
       0.645
ANP72344.1
2-deoxy-D-gluconate 3-dehydrogenase; Pfam:pfam00106 short chain dehydrogenase.
       0.521
ANP74174.1
Pfam:pfam11349 Protein of unknown function (DUF3151).
  
     0.416
ANP74692.1
Copper transporter; Pfam:pfam09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG).
  
     0.405
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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