STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72449.11,4-beta-xylanase. (338 aa)    
Predicted Functional Partners:
ANP72452.1
Putative ABC transporter permease protein; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
     0.868
ANP72453.1
Putative ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
     0.859
ANP72451.1
Sugar ABC transporter permease.
 
     0.853
ANP72450.1
Beta-mannosidase; Pfam:pfam00703 Glycosyl hydrolases family 2.
     
 0.783
ANP72448.1
Hypothetical protein; Pfam:pfam01869 BadF/BadG/BcrA/BcrD ATPase family.
  
    0.775
ANP72572.1
Pfam:pfam03772 Competence protein.
  
  
 0.464
ANP72484.1
Flagellar motor switch protein FliN; Pfam:pfam01052 Surface presentation of antigens (SPOA).
   
 
 0.455
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.