STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72498.1Membrane protein; Pfam:pfam06762 Lipase maturation factor. (510 aa)    
Predicted Functional Partners:
sucD
succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
      0.568
ANP72497.1
LacI family transcription regulator; Pfam:pfam13377 Periplasmic binding protein-like domain.
       0.543
ANP73775.1
LuxR family transcriptional regulator; Pfam:pfam07883 Cupin domain.
  
     0.426
ANP72493.1
Glycosidase; Pfam:pfam04041 Domain of unknown function (DUF377).
       0.408
ANP72494.1
Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.408
ANP72495.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.408
ANP72496.1
Sugar ABC transporter substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
       0.408
ANP72580.1
Hypothetical protein; Pfam:pfam09348 Domain of unknown function (DUF1990).
 
     0.402
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.