Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71287.1 | ANP72503.1 | PA27867_0313 | PA27867_1546 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Phytoene dehydrogenase; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain. | 0.555 |
ANP71287.1 | ANP72504.1 | PA27867_0313 | PA27867_1547 | Pfam:pfam03441 FAD binding domain of DNA photolyase. | Pfam:pfam00494 Squalene/phytoene synthase. | 0.506 |
ANP71776.1 | ANP72503.1 | PA27867_0809 | PA27867_1546 | Pfam:pfam00742 Homoserine dehydrogenase. | Phytoene dehydrogenase; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain. | 0.584 |
ANP72499.1 | ANP72500.1 | PA27867_1542 | PA27867_1543 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | 0.634 |
ANP72499.1 | ANP72501.1 | PA27867_1542 | PA27867_1544 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Lycopene e-cyclase isoprenoid transferase B. | 0.634 |
ANP72499.1 | ANP72502.1 | PA27867_1542 | PA27867_1545 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Carotenoid epsilon cyclase. | 0.634 |
ANP72499.1 | ANP72503.1 | PA27867_1542 | PA27867_1546 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Phytoene dehydrogenase; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain. | 0.634 |
ANP72499.1 | ANP72504.1 | PA27867_1542 | PA27867_1547 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Pfam:pfam00494 Squalene/phytoene synthase. | 0.640 |
ANP72499.1 | ANP72505.1 | PA27867_1542 | PA27867_1548 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | CrtE protein; Pfam:pfam00348 Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.645 |
ANP72499.1 | ANP72507.1 | PA27867_1542 | PA27867_1550 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Pfam:pfam01047 MarR family. | 0.462 |
ANP72499.1 | idi | PA27867_1542 | PA27867_1549 | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.716 |
ANP72500.1 | ANP72499.1 | PA27867_1543 | PA27867_1542 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | 0.634 |
ANP72500.1 | ANP72501.1 | PA27867_1543 | PA27867_1544 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Lycopene e-cyclase isoprenoid transferase B. | 0.984 |
ANP72500.1 | ANP72502.1 | PA27867_1543 | PA27867_1545 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Carotenoid epsilon cyclase. | 0.986 |
ANP72500.1 | ANP72503.1 | PA27867_1543 | PA27867_1546 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Phytoene dehydrogenase; Pfam:pfam13450 NAD(P)-binding Rossmann-like domain. | 0.978 |
ANP72500.1 | ANP72504.1 | PA27867_1543 | PA27867_1547 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Pfam:pfam00494 Squalene/phytoene synthase. | 0.976 |
ANP72500.1 | ANP72505.1 | PA27867_1543 | PA27867_1548 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | CrtE protein; Pfam:pfam00348 Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.936 |
ANP72500.1 | ANP72507.1 | PA27867_1543 | PA27867_1550 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Pfam:pfam01047 MarR family. | 0.805 |
ANP72500.1 | idi | PA27867_1543 | PA27867_1549 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.960 |
ANP72501.1 | ANP72499.1 | PA27867_1544 | PA27867_1542 | Lycopene e-cyclase isoprenoid transferase B. | RNA-binding protein S4; Pfam:pfam01479 S4 domain. | 0.634 |
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