STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72566.1Pfam:pfam00005 ABC transporter. (548 aa)    
Predicted Functional Partners:
ANP72567.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
 
 
0.999
ANP72564.1
Pfam:pfam01654 Bacterial Cytochrome Ubiquinol Oxidase.
  
 0.998
ANP72565.1
Pfam:pfam02322 Cytochrome oxidase subunit II.
 
  
 0.997
ANP71804.1
Multidrug ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
   
0.882
ANP71310.1
Pfam:pfam00005 ABC transporter.
   
0.805
metN-2
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
     0.663
ANP72563.1
CopY family transcriptional regulator; Pfam:pfam03965 Penicillinase repressor.
       0.652
ANP72562.1
Pfam:pfam01435 Peptidase family M48.
       0.625
ANP72138.1
Glutamate ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
     
0.595
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
      
 0.422
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.