STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72617.1Two-component system sensor protein; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (298 aa)    
Predicted Functional Partners:
ANP74674.1
Pfam:pfam07730 Histidine kinase.
  
     0.589
ANP72616.1
Pfam:pfam02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain.
 
     0.510
ANP74373.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.450
ANP72275.1
Hypothetical protein; Pfam:pfam07690 Major Facilitator Superfamily.
  
     0.436
ANP74675.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.431
ANP72599.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
 
 
 0.424
ANP72359.1
Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
 
 
 0.423
ANP72612.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.422
ANP72613.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
       0.422
ANP72614.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.422
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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