STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72651.1Membrane protein; Pfam:pfam13829 Domain of unknown function (DUF4191). (236 aa)    
Predicted Functional Partners:
ANP72668.1
Pfam:pfam11241 Protein of unknown function (DUF3043).
 
     0.778
ANP72827.1
ATPase; Pfam:pfam03993 Domain of Unknown Function (DUF349).
  
     0.761
ANP72869.1
Hypothetical protein; Pfam:pfam13834 Domain of unknown function (DUF4193).
  
     0.744
ANP72517.1
Pfam:pfam13411 MerR HTH family regulatory protein.
  
     0.740
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.735
lipB
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.735
rbpA
Electron transporter; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.686
ANP73683.1
ATPase AAA; Pfam:pfam13245 Part of AAA domain.
  
     0.681
ANP72866.1
Pfam:pfam12502 Protein of unknown function (DUF3710).
  
     0.649
ANP70987.1
Pfam:pfam12089 Transmembrane domain of unknown function (DUF3566).
  
     0.643
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.