STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72718.1Gluconolactonase; Pfam:pfam08450 SMP-30/Gluconolaconase/LRE-like region. (282 aa)    
Predicted Functional Partners:
ANP74290.1
Pfam:pfam01614 Bacterial transcriptional regulator.
      0.904
ANP72719.1
Hypothetical protein.
       0.773
ANP72720.1
Hypothetical protein; Pfam:pfam02586 Uncharacterized ACR, COG2135; Belongs to the SOS response-associated peptidase family.
       0.546
ANP74403.1
Collagen triple helix repeat protein; Pfam:pfam00149 Calcineurin-like phosphoesterase.
     
 0.486
ANP72722.1
DNA-directed DNA polymerase; Pfam:pfam00817 impB/mucB/samB family.
     
 0.401
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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