STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72752.1Pfam:pfam02628 Cytochrome oxidase assembly protein. (313 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.994
ANP72744.1
Sortase; Pfam:pfam02104 SURF1 family.
 
 
 0.787
ANP73830.1
Hypothetical protein; Pfam:pfam02104 SURF1 family.
 
 
 0.787
ANP72677.1
Cystathionine beta-lyase; Pfam:pfam00034 Cytochrome c.
 
  
 0.731
ANP72675.1
Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB.
 
   
 0.712
ANP72672.1
Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
  
 0.608
ANP72676.1
Ubiquinol-cytochrome C reductase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
  
  
 0.602
ANP72671.1
Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain.
 
  
 0.600
ANP72750.1
ABC transporter permease; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
       0.595
ANP72751.1
Fe-S cluster assembly protein SufB; Pfam:pfam01458 Uncharacterized protein family (UPF0051).
       0.595
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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