STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72855.1ATPase; Pfam:pfam03969 AFG1-like ATPase. (351 aa)    
Predicted Functional Partners:
ANP71559.1
Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
 
   
 0.831
ANP71556.1
Succinate dehydrogenase; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.805
ANP71558.1
Pfam:pfam01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
 
     0.804
ANP71557.1
Fumarate reductase; Pfam:pfam00890 FAD binding domain.
 
    0.803
ANP72099.1
Tetratricopeptide repeat protein.
  
     0.775
ANP72133.1
ATPase.
  
     0.774
ANP72802.1
Hypothetical protein.
  
    0.756
ANP72856.1
Thiosulfate sulfurtransferase; Pfam:pfam00581 Rhodanese-like domain.
       0.623
ANP72857.1
Cysteine desufuration protein SufE; Pfam:pfam02657 Fe-S metabolizm associated domain.
       0.576
tatA-2
Sec-independent secretion protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
     0.499
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.