STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72890.1Alkylphosphonate utilization operon protein PhnA; Pfam:pfam03831 PhnA protein. (129 aa)    
Predicted Functional Partners:
ANP72888.1
Zinc-binding protein; Belongs to the UPF0225 family.
 
     0.608
ANP72889.1
Pfam:pfam04832 SOUL heme-binding protein.
       0.603
ANP72891.1
Hypothetical protein.
       0.545
ANP72892.1
Pfam:pfam04012 PspA/IM30 family.
       0.545
ANP72887.1
Pfam:pfam00072 Response regulator receiver domain.
       0.529
ANP72886.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.437
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.