Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71204.1 | ANP72130.1 | PA27867_0230 | PA27867_1164 | Thioredoxin; Pfam:pfam05768 Glutaredoxin-like domain (DUF836). | Pfam:pfam07179 SseB protein N-terminal domain. | 0.610 |
ANP71204.1 | ANP72902.1 | PA27867_0230 | PA27867_1949 | Thioredoxin; Pfam:pfam05768 Glutaredoxin-like domain (DUF836). | Pfam:pfam13223 Protein of unknown function (DUF4031). | 0.478 |
ANP71902.1 | ANP72130.1 | PA27867_0935 | PA27867_1164 | Pfam:pfam11238 Protein of unknown function (DUF3039). | Pfam:pfam07179 SseB protein N-terminal domain. | 0.575 |
ANP71902.1 | ANP72902.1 | PA27867_0935 | PA27867_1949 | Pfam:pfam11238 Protein of unknown function (DUF3039). | Pfam:pfam13223 Protein of unknown function (DUF4031). | 0.439 |
ANP72130.1 | ANP71204.1 | PA27867_1164 | PA27867_0230 | Pfam:pfam07179 SseB protein N-terminal domain. | Thioredoxin; Pfam:pfam05768 Glutaredoxin-like domain (DUF836). | 0.610 |
ANP72130.1 | ANP71902.1 | PA27867_1164 | PA27867_0935 | Pfam:pfam07179 SseB protein N-terminal domain. | Pfam:pfam11238 Protein of unknown function (DUF3039). | 0.575 |
ANP72130.1 | ANP72902.1 | PA27867_1164 | PA27867_1949 | Pfam:pfam07179 SseB protein N-terminal domain. | Pfam:pfam13223 Protein of unknown function (DUF4031). | 0.463 |
ANP72628.1 | ANP72902.1 | PA27867_1674 | PA27867_1949 | ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain. | Pfam:pfam13223 Protein of unknown function (DUF4031). | 0.464 |
ANP72628.1 | rplU | PA27867_1674 | PA27867_1948 | ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.452 |
ANP72902.1 | ANP71204.1 | PA27867_1949 | PA27867_0230 | Pfam:pfam13223 Protein of unknown function (DUF4031). | Thioredoxin; Pfam:pfam05768 Glutaredoxin-like domain (DUF836). | 0.478 |
ANP72902.1 | ANP71902.1 | PA27867_1949 | PA27867_0935 | Pfam:pfam13223 Protein of unknown function (DUF4031). | Pfam:pfam11238 Protein of unknown function (DUF3039). | 0.439 |
ANP72902.1 | ANP72130.1 | PA27867_1949 | PA27867_1164 | Pfam:pfam13223 Protein of unknown function (DUF4031). | Pfam:pfam07179 SseB protein N-terminal domain. | 0.463 |
ANP72902.1 | ANP72628.1 | PA27867_1949 | PA27867_1674 | Pfam:pfam13223 Protein of unknown function (DUF4031). | ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain. | 0.464 |
ANP72902.1 | ANP74036.1 | PA27867_1949 | PA27867_3102 | Pfam:pfam13223 Protein of unknown function (DUF4031). | Branched-chain amino acid transporter AzlD. | 0.412 |
ANP72902.1 | nnrE | PA27867_1949 | PA27867_1384 | Pfam:pfam13223 Protein of unknown function (DUF4031). | Carbohydrate kinase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | 0.782 |
ANP72902.1 | rplU | PA27867_1949 | PA27867_1948 | Pfam:pfam13223 Protein of unknown function (DUF4031). | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.507 |
ANP72902.1 | rpmA | PA27867_1949 | PA27867_1947 | Pfam:pfam13223 Protein of unknown function (DUF4031). | Pfam:pfam01016 Ribosomal L27 protein; Belongs to the bacterial ribosomal protein bL27 family. | 0.478 |
ANP74036.1 | ANP72902.1 | PA27867_3102 | PA27867_1949 | Branched-chain amino acid transporter AzlD. | Pfam:pfam13223 Protein of unknown function (DUF4031). | 0.412 |
nnrE | ANP72902.1 | PA27867_1384 | PA27867_1949 | Carbohydrate kinase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family. | Pfam:pfam13223 Protein of unknown function (DUF4031). | 0.782 |
rplU | ANP72628.1 | PA27867_1948 | PA27867_1674 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain. | 0.452 |
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