STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72909.1Pfam:pfam14017 Protein of unknown function (DUF4233). (115 aa)    
Predicted Functional Partners:
ANP72910.1
Folylpolyglutamate synthase; Pfam:pfam08245 Mur ligase middle domain; Belongs to the folylpolyglutamate synthase family.
  
  
 0.914
ileS
isoleucyl-tRNA synthase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
       0.848
ANP72908.1
Pfam:pfam00334 Nucleoside diphosphate kinase.
     
 0.753
ANP72130.1
Pfam:pfam07179 SseB protein N-terminal domain.
  
   
 0.696
ANP71660.1
Alpha-ketoglutarate decarboxylase.
  
     0.616
ANP72663.1
Hypothetical protein.
  
     0.586
rpmF
Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.582
ANP71588.1
Transcriptional regulator; Pfam:pfam03816 Cell envelope-related transcriptional attenuator domain.
  
     0.580
ANP71204.1
Thioredoxin; Pfam:pfam05768 Glutaredoxin-like domain (DUF836).
  
     0.576
ANP73040.1
Transcriptional regulator; Pfam:pfam03816 Cell envelope-related transcriptional attenuator domain.
  
     0.576
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.