STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72968.1Membrane protein; Pfam:pfam09819 ABC-type cobalt transport system, permease component. (252 aa)    
Predicted Functional Partners:
ANP72966.1
ABC transporter; Pfam:pfam02361 Cobalt transport protein.
 
  
 0.967
ANP72967.1
Pfam:pfam00005 ABC transporter.
 
  
 0.959
ANP74164.1
Pfam:pfam02361 Cobalt transport protein.
 
  
 0.845
ANP72965.1
ATP-binding protein; Pfam:pfam13207 AAA domain.
 
     0.791
ANP74163.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
 
    0.758
ANP72964.1
Hypothetical protein.
       0.732
ANP74161.1
Hypothetical protein; Pfam:pfam07615 YKOF-related Family.
 
  
 0.569
ANP72969.1
Pfam:pfam09579 Sporulation protein YtfJ (Spore_YtfJ).
       0.451
ANP73310.1
Pfam:pfam04977 Septum formation initiator.
  
     0.425
ANP72557.1
ACP synthase; Pfam:pfam09949 Uncharacterized conserved protein (DUF2183).
  
     0.402
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.