STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP72987.1Glycosyl hydrolase; Pfam:pfam00128 Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family. (685 aa)    
Predicted Functional Partners:
glgB
Glycogen-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
0.985
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 0.982
ANP72990.1
Glycogen phosphorylase; Pfam:pfam11897 Protein of unknown function (DUF3417).
  
 
 0.958
ANP72735.1
Trehalose synthase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
 
 0.944
ANP71493.1
Alpha-amylase; Pfam:pfam00128 Alpha amylase, catalytic domain.
 
 
 0.928
ANP71162.1
Pfam:pfam02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III.
    
 0.918
ANP72880.1
Glycogen debranching protein; Pfam:pfam02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.909
ANP73677.1
UTP--glucose-1-phosphate uridylyltransferase; Pfam:pfam00483 Nucleotidyl transferase.
     
 0.909
ANP74653.1
Isoamylase; Pfam:pfam02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.908
ANP72738.1
Pfam:pfam00534 Glycosyl transferases group 1.
   
 
 0.903
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.