STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73067.1Hypothetical protein; Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. (103 aa)    
Predicted Functional Partners:
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
       0.555
ANP73389.1
Pfam:pfam11196 Protein of unknown function (DUF2834).
 
     0.551
ANP71718.1
Methanol dehydrogenase; Pfam:pfam04536 TLP18.
 
     0.464
ANP73065.1
5,10-methylene tetrahydromethanopterin reductase; Pfam:pfam00296 Luciferase-like monooxygenase.
       0.458
ANP71606.1
Hypothetical protein.
  
     0.457
ANP71584.1
Hypothetical protein; Pfam:pfam03703 Bacterial PH domain.
  
    0.434
pat
Aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
     
 0.421
ANP74723.1
Pfam:pfam02028 BCCT family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
      
 0.416
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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