STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73080.1Pfam:pfam01882 Protein of unknown function DUF58. (467 aa)    
Predicted Functional Partners:
ANP73079.1
Hypothetical protein; Pfam:pfam01841 Transglutaminase-like superfamily.
    0.967
ANP73081.1
ATPase; Pfam:pfam07726 ATPase family associated with various cellular activities (AAA).
  
 0.904
ANP73078.1
Hypothetical protein; Pfam:pfam02620 Uncharacterized ACR, COG1399.
       0.775
rpmF
Pfam:pfam01783 Ribosomal L32p protein family; Belongs to the bacterial ribosomal protein bL32 family.
       0.772
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.739
ANP73083.1
ATP-dependent DNA helicase RecG; Pfam:pfam00270 DEAD/DEAH box helicase.
       0.567
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.563
ANP73098.1
Hypothetical protein; Pfam:pfam01841 Transglutaminase-like superfamily.
 
    0.521
ANP73100.1
ATPase AAA; Pfam:pfam07726 ATPase family associated with various cellular activities (AAA).
  
 0.520
ANP71814.1
ATPase AAA; Pfam:pfam07726 ATPase family associated with various cellular activities (AAA).
  
 0.512
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.