STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73194.1Putative membrane protein. (83 aa)    
Predicted Functional Partners:
ANP72533.1
Hypothetical protein.
  
     0.556
ANP71611.1
Pfam:pfam10604 Polyketide cyclase / dehydrase and lipid transport.
  
     0.530
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily.
       0.525
ANP73969.1
Hypothetical protein.
  
     0.516
ANP73192.1
Pfam:pfam01063 Aminotransferase class IV.
       0.507
ANP73191.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
       0.496
ANP71462.1
Pfam:pfam13196 Protein of unknown function (DUF4012).
  
     0.432
ANP73833.1
Hypothetical protein; Pfam:pfam13338 Domain of unknown function (DUF4095).
  
     0.432
ANP71660.1
Alpha-ketoglutarate decarboxylase.
  
     0.422
ANP72100.1
Hypothetical protein; Pfam:pfam13338 Domain of unknown function (DUF4095).
  
     0.417
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.