STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73235.1Chromosome replication initiation inhibitor protein; Pfam:pfam00126 Bacterial regulatory helix-turn-helix protein, lysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
ANP73236.1
Amino acid transporter; Pfam:pfam01810 LysE type translocator.
 
   
 0.958
ANP73595.1
HxlR family transcriptional regulator; Pfam:pfam01638 HxlR-like helix-turn-helix.
  
    0.771
ANP71467.1
Hypothetical protein; Pfam:pfam03816 Cell envelope-related transcriptional attenuator domain.
   
    0.746
ANP72731.1
NAD-dependent deacetylase; Pfam:pfam02146 Sir2 family.
   
    0.625
ANP73617.1
Hypothetical protein.
   
    0.612
ANP71131.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
   
  
 0.570
ANP72779.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.500
ANP73124.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
   
    0.499
ANP73135.1
Putative transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
   
    0.499
ANP73237.1
Hypothetical protein.
       0.441
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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