STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73244.1Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily. (576 aa)    
Predicted Functional Partners:
ANP73245.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.978
ANP73246.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.920
ANP73247.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
  
 0.901
ANP71057.1
ABC transporter, permease protein; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.834
ANP71972.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.830
ANP74143.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.812
ANP73243.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
 
     0.800
ANP73918.1
Peptide ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.795
ANP73471.1
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
 0.718
ANP71278.1
Hypothetical protein; Pfam:pfam00005 ABC transporter.
 
  
0.690
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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