STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73378.1Hypothetical protein; Pfam:pfam00916 Sulfate transporter family. (503 aa)    
Predicted Functional Partners:
ANP72675.1
Pfam:pfam13631 Cytochrome b(N-terminal)/b6/petB.
    
 
 0.719
sbcD
DNA repair exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.693
ANP73674.1
Ankyrin; Pfam:pfam12796 Ankyrin repeats (3 copies).
    
 
 0.666
ANP74450.1
DNA-directed RNA polymerase beta subunit.
    
 
 0.666
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.643
ANP73377.1
Pfam:pfam13411 MerR HTH family regulatory protein.
       0.551
ANP73794.1
Hypothetical protein; Pfam:pfam00361 NADH-Ubiquinone/plastoquinone (complex I), various chains.
  
  
 0.499
ANP71313.1
Cysteine synthase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
   
 
 0.460
ANP73282.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
  
 0.439
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.