STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73389.1Pfam:pfam11196 Protein of unknown function (DUF2834). (121 aa)    
Predicted Functional Partners:
ANP73390.1
Hypothetical protein; Pfam:pfam13365 Trypsin-like peptidase domain.
       0.701
ANP73067.1
Hypothetical protein; Pfam:pfam03992 Antibiotic biosynthesis monooxygenase.
 
     0.551
ANP71918.1
Hypothetical protein.
  
     0.524
ANP73391.1
Hypothetical protein; Pfam:pfam13476 AAA domain.
       0.516
sbcD
DNA repair exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
       0.516
ANP72904.1
Putative membrane protein.
  
     0.503
ANP71890.1
Hypothetical protein.
  
     0.502
ANP72520.1
Hypothetical protein; Pfam:pfam13614 AAA domain.
  
     0.502
ANP71886.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.441
ANP71647.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.