STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73474.1Amidohydrolase; Pfam:pfam01979 Amidohydrolase family. (421 aa)    
Predicted Functional Partners:
ANP72037.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
      0.870
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.783
ANP73475.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
       0.773
ANP71038.1
Histidine ammonia-lyase; Pfam:pfam00221 Aromatic amino acid lyase.
  
  
 0.745
ANP73191.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Pfam:pfam01557 Fumarylacetoacetate (FAA) hydrolase family.
      0.719
ANP74154.1
Amidohydrolase; Pfam:pfam13147 Amidohydrolase.
  
     0.518
ANP73159.1
Pfam:pfam01546 Peptidase family M20/M25/M40; Belongs to the peptidase M20A family.
 
   
 0.497
ANP73473.1
Hypothetical protein; Pfam:pfam00496 Bacterial extracellular solute-binding proteins, family 5 Middle.
       0.474
ANP71710.1
Arginase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
  
  
 0.404
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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