STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73552.1Diguanylate phosphodiesterase; Pfam:pfam00563 EAL domain. (512 aa)    
Predicted Functional Partners:
ANP71345.1
Pfam:pfam00069 Protein kinase domain.
   
 0.921
ANP73254.1
Putative diguanylate cyclase; Pfam:pfam01590 GAF domain.
    
 0.902
ANP73553.1
Methyltransferase type 12; Pfam:pfam13847 Methyltransferase domain.
 
     0.826
ANP74218.1
ABC transporter substrate-binding protein; Pfam:pfam09084 NMT1/THI5 like.
      0.813
ANP72181.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
 
 
0.712
ANP73551.1
Hypothetical protein; Pfam:pfam11964 SpoIIAA-like.
       0.653
ANP71424.1
Hypothetical protein; Pfam:pfam00990 GGDEF domain.
 
 
 0.609
ANP71173.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
 
 
0.587
ANP72258.1
Putative ammonia channel; Pfam:pfam00909 Ammonium Transporter Family.
 
      0.573
ANP73554.1
Pfam:pfam02771 Acyl-CoA dehydrogenase, N-terminal domain.
       0.557
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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