STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73563.1Hypothetical protein. (322 aa)    
Predicted Functional Partners:
ANP73562.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
 
     0.922
ANP73564.1
Pfam:pfam12697 Alpha/beta hydrolase family.
       0.556
ANP74319.1
Hypothetical protein; Pfam:pfam13601 Winged helix DNA-binding domain.
  
     0.439
ANP73565.1
Pfam:pfam08241 Methyltransferase domain.
       0.413
ANP73560.1
Hypothetical protein; Pfam:pfam14518 Iron-containing redox enzyme.
       0.405
ANP73561.1
Pfam:pfam09360 Iron-binding zinc finger CDGSH type.
       0.405
ANP73645.1
ABC transporter.
  
     0.405
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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