STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73564.1Pfam:pfam12697 Alpha/beta hydrolase family. (231 aa)    
Predicted Functional Partners:
ANP73562.1
Pfam:pfam00392 Bacterial regulatory proteins, gntR family.
  
    0.558
ANP73563.1
Hypothetical protein.
       0.556
ANP73565.1
Pfam:pfam08241 Methyltransferase domain.
       0.556
ANP74249.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.492
ANP74303.1
Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.465
ANP74305.1
Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.464
ANP74621.1
Hypothetical protein; Pfam:pfam12697 Alpha/beta hydrolase family.
  
     0.444
ANP73561.1
Pfam:pfam09360 Iron-binding zinc finger CDGSH type.
 
     0.407
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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