STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73594.1Hypothetical protein; Pfam:pfam08378 Nuclease-related domain. (266 aa)    
Predicted Functional Partners:
leuS
Pfam:pfam13603 Leucyl-tRNA synthetase, Domain 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.656
ANP72954.1
Single-stranded DNA-binding protein; Pfam:pfam00436 Single-strand binding protein family.
  
 
 0.604
ANP74513.1
Single-stranded DNA-binding protein; Pfam:pfam00436 Single-strand binding protein family.
  
 
 0.604
ANP74728.1
Single-stranded DNA-binding protein; Pfam:pfam00436 Single-strand binding protein family.
  
 
 0.604
ANP73463.1
Hypothetical protein; Pfam:pfam01814 Hemerythrin HHE cation binding domain.
  
    0.596
ANP73372.1
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
 
 
 0.564
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.530
pheT
phenylalanyl-tRNA synthetase subunit beta; Pfam:pfam03483 B3/4 domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.506
ANP73710.1
Hypothetical protein; Pfam:pfam05257 CHAP domain.
  
   
 0.501
ANP71965.1
Thiol-disulfide oxidoreductase; Pfam:pfam04134 Protein of unknown function, DUF393.
  
     0.489
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.