STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73743.1Lipopolysaccharide kinase; Pfam:pfam13224 Domain of unknown function (DUF4032). (434 aa)    
Predicted Functional Partners:
tsaD
N(6)-L-threonylcarbamoyladenine synthase TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 0.948
ANP73742.1
Sugar ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
  
    0.652
ANP73741.1
Hypothetical protein; Pfam:pfam13462 Thioredoxin.
 
     0.462
ANP73205.1
Trehalose-phosphatase; Pfam:pfam00982 Glycosyltransferase family 20.
 
     0.450
ANP72738.1
Pfam:pfam00534 Glycosyl transferases group 1.
 
     0.422
ANP73768.1
DNA-directed RNA polymerase subunit beta.
  
     0.421
ANP70987.1
Pfam:pfam12089 Transmembrane domain of unknown function (DUF3566).
  
     0.419
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.