ANP73750.1 protein (Cryobacterium arcticum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ANP73750.1

Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (384 aa)

Predicted Functional Partners:

ANP73749.1

0.997

ANP71541.1

0.940

ANP71640.1

0.921

ANP71345.1

0.912

ANP71622.1

0.902

ANP73725.1

0.897

ANP71880.1

0.893

ANP73254.1

0.891

ANP71296.1

0.880

ANP74439.1

0.869

Your Current Organism:

Cryobacterium arcticum

NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANP71296.1	ANP73750.1	PA27867_0322	PA27867_2811	Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.880
ANP71345.1	ANP73750.1	PA27867_0372	PA27867_2811	Pfam:pfam00069 Protein kinase domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.912
ANP71541.1	ANP73750.1	PA27867_0572	PA27867_2811	Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.940
ANP71622.1	ANP73750.1	PA27867_0654	PA27867_2811	Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.902
ANP71640.1	ANP73750.1	PA27867_0673	PA27867_2811	Pfam:pfam00486 Transcriptional regulatory protein, C terminal.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.921
ANP71880.1	ANP73750.1	PA27867_0913	PA27867_2811	Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.893
ANP73254.1	ANP73750.1	PA27867_2303	PA27867_2811	Putative diguanylate cyclase; Pfam:pfam01590 GAF domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.891
ANP73725.1	ANP73750.1	PA27867_2786	PA27867_2811	Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.897
ANP73749.1	ANP73750.1	PA27867_2810	PA27867_2811	XRE family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.997
ANP73750.1	ANP71296.1	PA27867_2811	PA27867_0322	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00072 Response regulator receiver domain.	0.880
ANP73750.1	ANP71345.1	PA27867_2811	PA27867_0372	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00069 Protein kinase domain.	0.912
ANP73750.1	ANP71541.1	PA27867_2811	PA27867_0572	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Hypothetical protein; Pfam:pfam00072 Response regulator receiver domain.	0.940
ANP73750.1	ANP71622.1	PA27867_2811	PA27867_0654	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00072 Response regulator receiver domain.	0.902
ANP73750.1	ANP71640.1	PA27867_2811	PA27867_0673	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00486 Transcriptional regulatory protein, C terminal.	0.921
ANP73750.1	ANP71880.1	PA27867_2811	PA27867_0913	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00072 Response regulator receiver domain.	0.893
ANP73750.1	ANP73254.1	PA27867_2811	PA27867_2303	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Putative diguanylate cyclase; Pfam:pfam01590 GAF domain.	0.891
ANP73750.1	ANP73725.1	PA27867_2811	PA27867_2786	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00072 Response regulator receiver domain.	0.897
ANP73750.1	ANP73749.1	PA27867_2811	PA27867_2810	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	XRE family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.	0.997
ANP73750.1	ANP74439.1	PA27867_2811	PA27867_3516	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	Pfam:pfam00072 Response regulator receiver domain.	0.869
ANP74439.1	ANP73750.1	PA27867_3516	PA27867_2811	Pfam:pfam00072 Response regulator receiver domain.	Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.	0.869