Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP71503.1 | ANP73766.1 | PA27867_0534 | PA27867_2828 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.850 |
ANP71503.1 | ANP74681.1 | PA27867_0534 | PA27867_3766 | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.786 |
ANP72500.1 | ANP72502.1 | PA27867_1543 | PA27867_1545 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Carotenoid epsilon cyclase. | 0.986 |
ANP72500.1 | ANP73766.1 | PA27867_1543 | PA27867_2828 | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.471 |
ANP72502.1 | ANP72500.1 | PA27867_1545 | PA27867_1543 | Carotenoid epsilon cyclase. | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | 0.986 |
ANP72502.1 | ANP73766.1 | PA27867_1545 | PA27867_2828 | Carotenoid epsilon cyclase. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.528 |
ANP73228.1 | ANP73766.1 | PA27867_2277 | PA27867_2828 | RNA polymerase sigma factor SigK; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.940 |
ANP73228.1 | ANP74681.1 | PA27867_2277 | PA27867_3766 | RNA polymerase sigma factor SigK; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.761 |
ANP73364.1 | ANP73766.1 | PA27867_2414 | PA27867_2828 | Oxidoreductase; Pfam:pfam00174 Oxidoreductase molybdopterin binding domain. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.508 |
ANP73765.1 | ANP73766.1 | PA27867_2827 | PA27867_2828 | Pfam:pfam01063 Aminotransferase class IV. | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | 0.447 |
ANP73765.1 | ANP73767.1 | PA27867_2827 | PA27867_2829 | Pfam:pfam01063 Aminotransferase class IV. | RNA polymerase sigma factor SigK; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.448 |
ANP73766.1 | ANP71503.1 | PA27867_2828 | PA27867_0534 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | RNA polymerase subunit sigma-24; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.850 |
ANP73766.1 | ANP72500.1 | PA27867_2828 | PA27867_1543 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | Prenyltransferase; Pfam:pfam01040 UbiA prenyltransferase family. | 0.471 |
ANP73766.1 | ANP72502.1 | PA27867_2828 | PA27867_1545 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | Carotenoid epsilon cyclase. | 0.528 |
ANP73766.1 | ANP73228.1 | PA27867_2828 | PA27867_2277 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | RNA polymerase sigma factor SigK; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.940 |
ANP73766.1 | ANP73364.1 | PA27867_2828 | PA27867_2414 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | Oxidoreductase; Pfam:pfam00174 Oxidoreductase molybdopterin binding domain. | 0.508 |
ANP73766.1 | ANP73765.1 | PA27867_2828 | PA27867_2827 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | Pfam:pfam01063 Aminotransferase class IV. | 0.447 |
ANP73766.1 | ANP73767.1 | PA27867_2828 | PA27867_2829 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | RNA polymerase sigma factor SigK; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. ECF subfamily. | 0.990 |
ANP73766.1 | ANP73768.1 | PA27867_2828 | PA27867_2830 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | DNA-directed RNA polymerase subunit beta. | 0.449 |
ANP73766.1 | ANP74615.1 | PA27867_2828 | PA27867_3698 | Hypothetical protein; Pfam:pfam10099 Anti-sigma-K factor rskA. | Hypothetical protein; Pfam:pfam03372 Endonuclease/Exonuclease/phosphatase family. | 0.473 |
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