STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73953.1Putative type IV fimbrial assembly protein PilC; Pfam:pfam00482 Type II secretion system (T2SS), protein F. (409 aa)    
Predicted Functional Partners:
ANP73955.1
Pfam:pfam00437 Type II/IV secretion system protein.
 
 0.998
ANP73952.1
Hypothetical protein.
 
  
 0.970
ANP73954.1
Twitching motility protein; Pfam:pfam00437 Type II/IV secretion system protein.
 
  
 0.970
ANP73947.1
Cell division protein FtsA; Pfam:pfam11104 Type IV pilus assembly protein PilM.
 
 
 
 0.953
ANP73948.1
Peptidase A24; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.939
ANP73950.1
Hypothetical protein.
  
  
 0.817
ANP73951.1
Hypothetical protein.
  
  
 0.817
ANP73945.1
Hypothetical protein.
   
 
 0.795
ANP73946.1
Hypothetical protein.
   
 
 0.795
ANP72572.1
Pfam:pfam03772 Competence protein.
  
  
 0.791
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.