STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP73954.1Twitching motility protein; Pfam:pfam00437 Type II/IV secretion system protein. (569 aa)    
Predicted Functional Partners:
ANP73953.1
Putative type IV fimbrial assembly protein PilC; Pfam:pfam00482 Type II secretion system (T2SS), protein F.
 
  
 0.970
ANP73952.1
Hypothetical protein.
 
  
 0.908
ANP73948.1
Peptidase A24; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.906
ANP73947.1
Cell division protein FtsA; Pfam:pfam11104 Type IV pilus assembly protein PilM.
 
   
 0.900
ANP73955.1
Pfam:pfam00437 Type II/IV secretion system protein.
 
  
0.874
ANP73945.1
Hypothetical protein.
  
  
 0.596
ANP73946.1
Hypothetical protein.
  
  
 0.579
ANP72572.1
Pfam:pfam03772 Competence protein.
     
 0.569
ANP72181.1
Hypothetical protein; Pfam:pfam00563 EAL domain.
 
   
 0.537
ANP73949.1
Hypothetical protein.
     
 0.496
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.