Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP72312.1 | ANP74053.1 | PA27867_1352 | PA27867_3119 | CoA-disulfide reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase. | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | 0.573 |
ANP74052.1 | ANP74053.1 | PA27867_3118 | PA27867_3119 | ATP-binding protein. | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | 0.520 |
ANP74053.1 | ANP72312.1 | PA27867_3119 | PA27867_1352 | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | CoA-disulfide reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase. | 0.573 |
ANP74053.1 | ANP74052.1 | PA27867_3119 | PA27867_3118 | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | ATP-binding protein. | 0.520 |
ANP74053.1 | ANP74054.1 | PA27867_3119 | PA27867_3120 | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | Chemotaxis protein CheY. | 0.541 |
ANP74053.1 | ANP74055.1 | PA27867_3119 | PA27867_3121 | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | MarR family transcriptional regulator; Pfam:pfam13601 Winged helix DNA-binding domain. | 0.542 |
ANP74054.1 | ANP74053.1 | PA27867_3120 | PA27867_3119 | Chemotaxis protein CheY. | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | 0.541 |
ANP74054.1 | ANP74055.1 | PA27867_3120 | PA27867_3121 | Chemotaxis protein CheY. | MarR family transcriptional regulator; Pfam:pfam13601 Winged helix DNA-binding domain. | 0.786 |
ANP74055.1 | ANP74053.1 | PA27867_3121 | PA27867_3119 | MarR family transcriptional regulator; Pfam:pfam13601 Winged helix DNA-binding domain. | MBL fold metallo-hydrolase; Pfam:pfam00753 Metallo-beta-lactamase superfamily. | 0.542 |
ANP74055.1 | ANP74054.1 | PA27867_3121 | PA27867_3120 | MarR family transcriptional regulator; Pfam:pfam13601 Winged helix DNA-binding domain. | Chemotaxis protein CheY. | 0.786 |