Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANP74233.1 | ANP74234.1 | PA27867_3304 | PA27867_3305 | Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family. | Hypothetical protein. | 0.773 |
ANP74233.1 | ANP74235.1 | PA27867_3304 | PA27867_3306 | Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family. | Pfam:pfam07947 YhhN-like protein. | 0.517 |
ANP74234.1 | ANP74233.1 | PA27867_3305 | PA27867_3304 | Hypothetical protein. | Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family. | 0.773 |
ANP74234.1 | ANP74235.1 | PA27867_3305 | PA27867_3306 | Hypothetical protein. | Pfam:pfam07947 YhhN-like protein. | 0.517 |
ANP74235.1 | ANP74233.1 | PA27867_3306 | PA27867_3304 | Pfam:pfam07947 YhhN-like protein. | Hydrolase; Pfam:pfam12697 Alpha/beta hydrolase family. | 0.517 |
ANP74235.1 | ANP74234.1 | PA27867_3306 | PA27867_3305 | Pfam:pfam07947 YhhN-like protein. | Hypothetical protein. | 0.517 |
ANP74235.1 | ANP74236.1 | PA27867_3306 | PA27867_3307 | Pfam:pfam07947 YhhN-like protein. | Hypothetical protein; Pfam:pfam09335 SNARE associated Golgi protein. | 0.453 |
ANP74235.1 | ANP74266.1 | PA27867_3306 | PA27867_3337 | Pfam:pfam07947 YhhN-like protein. | Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.437 |
ANP74236.1 | ANP74235.1 | PA27867_3307 | PA27867_3306 | Hypothetical protein; Pfam:pfam09335 SNARE associated Golgi protein. | Pfam:pfam07947 YhhN-like protein. | 0.453 |
ANP74266.1 | ANP74235.1 | PA27867_3337 | PA27867_3306 | Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Pfam:pfam07947 YhhN-like protein. | 0.437 |