STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP74485.1Beta-xylanase; Pfam:pfam00331 Glycosyl hydrolase family 10. (429 aa)    
Predicted Functional Partners:
ANP71251.1
Putative sugar ABC transporter, substrate-binding protein; Pfam:pfam13416 Bacterial extracellular solute-binding protein.
 
   
 0.602
ANP72596.1
Hypothetical protein; Pfam:pfam00756 Putative esterase.
  
 
 0.577
ANP71252.1
Putative sugar ABC transporter, permease component; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
   
 0.565
ANP74486.1
Anaerobic ribonucleoside-triphosphate reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
  
    0.501
ANP74487.1
Pfam:pfam13597 Anaerobic ribonucleoside-triphosphate reductase.
       0.490
ANP74484.1
Pfam:pfam03741 Integral membrane protein TerC family.
       0.459
ANP71429.1
Putative cellobiohydrolase; Pfam:pfam01341 Glycosyl hydrolases family 6; Belongs to the glycosyl hydrolase family 6.
     
 0.412
ANP71253.1
ABC-type transporter, integral membrane subunit; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
   
 0.410
ANP71254.1
Beta-glucosidase; Pfam:pfam00933 Glycosyl hydrolase family 3 N terminal domain.
 
   
 0.403
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.