STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP74592.1Pfam:pfam12847 Methyltransferase domain. (215 aa)    
Predicted Functional Partners:
ANP72847.1
Thioredoxin reductase; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.767
ANP72436.1
Molybdopterin cofactor biosynthesis protein; Pfam:pfam02391 MoaE protein.
   
    0.508
ANP74591.1
Riboflavin biosynthesis protein RibD; Pfam:pfam01872 RibD C-terminal domain.
       0.496
ANP74590.1
ADP-ribose pyrophosphatase; Pfam:pfam00293 NUDIX domain.
       0.418
ANP74589.1
Hypothetical protein.
       0.417
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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