STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR33863.1Flagellar hook protein FlgE. (435 aa)    
Predicted Functional Partners:
SFR33588.1
Rod binding protein.
 
  
 0.999
flgI
Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.999
SFR36469.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
    0.999
SFR33856.1
Flagellar hook-associated protein 1 FlgK.
 
  
 0.998
SFR33849.1
Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.995
SFR33601.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.994
SFR53866.1
Flagellar motor switch protein FliG.
 
  
 0.993
SFR33869.1
Chemotaxis protein MotB.
 
  
 0.985
SFR51778.1
Type III flagellar switch regulator (C-ring) FliN C-term.
 
  
 0.972
SFR33595.1
Hook-length control protein FliK.
 
 
 0.969
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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