STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR37332.1Acetyltransferase (GNAT) family protein. (169 aa)    
Predicted Functional Partners:
SFR37348.1
D-aminopeptidase.
  
 
  0.797
SFR37324.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.773
SFR37340.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.773
SFR37300.1
Peptide/nickel transport system permease protein.
       0.746
SFR37307.1
Peptide/nickel transport system permease protein.
       0.746
SFR37316.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.746
SFR37295.1
Peptide/nickel transport system substrate-binding protein.
       0.677
panB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
 
  0.593
SFR37355.1
Gluconate 5-dehydrogenase.
       0.584
SFR37365.1
Gluconokinase.
       0.584
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.