STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR40083.1Signal transduction histidine kinase. (437 aa)    
Predicted Functional Partners:
SFR40076.1
Two-component system, OmpR family, response regulator.
  0.972
SFR32638.1
Response regulator receiver domain-containing protein.
   
 0.926
SFR40024.1
Two-component system, OmpR family, response regulator RpaB.
  0.904
SFR32688.1
PAS domain S-box-containing protein.
 
 
0.892
SFR49819.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 
  0.880
SFR51807.1
Response regulator receiver domain-containing protein.
  
  0.880
SFR34776.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
 
  0.877
SFR34460.1
Two-component system, OmpR family, response regulator.
 
  0.874
SFR33021.1
Two-component system, OmpR family, response regulator.
 
  0.872
SFR48686.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  0.872
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.