STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR40752.1Multiple sugar transport system substrate-binding protein. (422 aa)    
Predicted Functional Partners:
SFR40738.1
Multiple sugar transport system permease protein.
 
  0.960
SFR40744.1
Multiple sugar transport system permease protein.
 
  0.958
SFR40731.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.937
SFR40725.1
Trehalase.
 
     0.860
SFR40757.1
Transcriptional regulator, LacI family.
 
     0.787
SFR39401.1
Sorbitol ABC transporter membrane protein.
   
  0.662
SFR40519.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.662
SFR45754.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
   
  0.662
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
   
  0.662
SFR50596.1
Maltose ABC transporter membrane protein/trehalose ABC transporter membrane protein/sucrose ABC transporter membrane protein.
   
  0.662
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.