Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR37639.1 | SFR41516.1 | SAMN04488002_0954 | SAMN04488002_1471 | Hypothetical protein. | SH3-like domain-containing protein. | 0.648 |
SFR37639.1 | SFR44975.1 | SAMN04488002_0954 | SAMN04488002_1903 | Hypothetical protein. | Uncharacterized conserved protein, UPF0335 family. | 0.708 |
SFR37639.1 | SFR47810.1 | SAMN04488002_0954 | SAMN04488002_2237 | Hypothetical protein. | DNA polymerase III, chi subunit. | 0.424 |
SFR37639.1 | SFR51203.1 | SAMN04488002_0954 | SAMN04488002_2720 | Hypothetical protein. | Hypothetical protein. | 0.779 |
SFR37639.1 | atpF-2 | SAMN04488002_0954 | SAMN04488002_3534 | Hypothetical protein. | F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.733 |
SFR37639.1 | recO | SAMN04488002_0954 | SAMN04488002_0025 | Hypothetical protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.714 |
SFR41073.1 | SFR44538.1 | SAMN04488002_1413 | SAMN04488002_1856 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Uncharacterized ACR, COG1399. | 0.641 |
SFR41073.1 | SFR44548.1 | SAMN04488002_1413 | SAMN04488002_1857 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Beta-barrel assembly machine subunit BamE. | 0.511 |
SFR41073.1 | SFR44966.1 | SAMN04488002_1413 | SAMN04488002_1902 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Hypothetical protein. | 0.622 |
SFR41073.1 | SFR44975.1 | SAMN04488002_1413 | SAMN04488002_1903 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Uncharacterized conserved protein, UPF0335 family. | 0.626 |
SFR41073.1 | SFR51203.1 | SAMN04488002_1413 | SAMN04488002_2720 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | Hypothetical protein. | 0.433 |
SFR41073.1 | atpF-2 | SAMN04488002_1413 | SAMN04488002_3534 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.404 |
SFR41516.1 | SFR37639.1 | SAMN04488002_1471 | SAMN04488002_0954 | SH3-like domain-containing protein. | Hypothetical protein. | 0.648 |
SFR41516.1 | SFR44975.1 | SAMN04488002_1471 | SAMN04488002_1903 | SH3-like domain-containing protein. | Uncharacterized conserved protein, UPF0335 family. | 0.623 |
SFR41516.1 | SFR47810.1 | SAMN04488002_1471 | SAMN04488002_2237 | SH3-like domain-containing protein. | DNA polymerase III, chi subunit. | 0.592 |
SFR41516.1 | SFR51203.1 | SAMN04488002_1471 | SAMN04488002_2720 | SH3-like domain-containing protein. | Hypothetical protein. | 0.719 |
SFR41516.1 | atpF-2 | SAMN04488002_1471 | SAMN04488002_3534 | SH3-like domain-containing protein. | F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.476 |
SFR41516.1 | recO | SAMN04488002_1471 | SAMN04488002_0025 | SH3-like domain-containing protein. | DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.530 |
SFR44538.1 | SFR41073.1 | SAMN04488002_1856 | SAMN04488002_1413 | Uncharacterized ACR, COG1399. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.641 |
SFR44538.1 | SFR44548.1 | SAMN04488002_1856 | SAMN04488002_1857 | Uncharacterized ACR, COG1399. | Beta-barrel assembly machine subunit BamE. | 0.789 |
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