STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR46143.1Glycerol-3-phosphate dehydrogenase. (471 aa)    
Predicted Functional Partners:
SFR46153.1
Thioredoxin reductase.
 
 0.993
SFR35081.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.911
SFR37926.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.826
SFR35239.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.825
SFR41934.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.825
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.789
SFR49076.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.768
SFR48415.1
Glycerol kinase; Belongs to the FGGY kinase family.
 
  
 0.748
SFR52856.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
     
 0.738
SFR39517.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.731
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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