STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR48770.1Protein of unknown function; Manually curated. (57 aa)    
Predicted Functional Partners:
SFR48776.1
Ornithine-acyl[acyl carrier protein] N-acyltransferase.
 
     0.755
SFR48764.1
Histidine phosphotransferase ChpT.
       0.726
SFR48783.1
Lyso-ornithine lipid acyltransferase.
       0.716
SFR38425.1
Uncharacterized conserved protein, contains Zn-finger domain.
  
     0.625
SFR47717.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
     0.551
thyX
Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
     0.432
SFR58454.1
Hypothetical protein.
  
     0.422
SFR35601.1
Acetyltransferase (GNAT) family protein.
  
     0.411
SFR35095.1
Glutamate synthase (NADPH) small subunit.
  
     0.404
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.