STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR51280.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
SFR51269.1
Cytochrome P450.
  0.963
SFR38411.1
Core-2/I-Branching enzyme.
  
 
   0.783
SFR55888.1
Capsular polysaccharide export protein.
 
     0.776
SFR51257.1
Protein of unknown function.
       0.773
SFR35161.1
Hypothetical protein.
  
     0.771
SFR38403.1
Sulfotransferase family protein.
  
     0.769
SFR44985.1
Hypothetical protein.
  
     0.769
SFR35167.1
Core-2/I-Branching enzyme.
  
     0.768
SFR35214.1
ABC-type polysaccharide/polyol phosphate export permease.
  
     0.765
SFR43238.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.