STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR51302.1Indolepyruvate ferredoxin oxidoreductase. (1135 aa)    
Predicted Functional Partners:
SFR34504.1
Tricarballylate dehydrogenase.
  
 0.992
SFR40831.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.992
SFR64259.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.969
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
 
 0.956
SFR46256.1
Dihydroorotate oxidase B, catalytic subunit.
  
 
 0.952
SFR35239.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.947
SFR41934.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.947
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.936
SFR52856.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 0.934
SFR35081.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.929
Your Current Organism:
Litoreibacter janthinus
NCBI taxonomy Id: 670154
Other names: DSM 26921, JCM 16492, KMM 3842, L. janthinus, Litoreibacter janthinus Romanenko et al. 2011, NRIC 0772, alpha proteobacterium KMM 3842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.