STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX62131.1Tat (twin-arginine translocation) pathway signal sequence. (344 aa)    
Predicted Functional Partners:
SDX62075.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.990
SDX62102.1
TRAP transporter, DctM subunit.
 
 
  0.990
SDX62175.1
Glutamine synthetase.
 
     0.893
SDX62245.1
4-hydroxybutyrate dehydrogenase.
 
    0.882
SDX62211.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
     0.881
SDX62047.1
Predicted N-formylglutamate amidohydrolase.
 
     0.857
SDX62017.1
Transcriptional regulator, RpiR family.
 
     0.851
SDX56683.1
Transcriptional regulator, RpiR family.
  
     0.548
SDX67111.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.486
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.