STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX66135.1Outer membrane transport energization protein ExbD. (123 aa)    
Predicted Functional Partners:
SDX66201.1
Outer membrane transport energization protein TonB.
 
 
 0.998
SDX66114.1
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1).
 
 
 0.996
SDX63355.1
Biopolymer transport protein ExbB.
 
 
 0.973
SDX66167.1
Biopolymer transport protein ExbD.
 
     0.969
SDX66083.1
Hypothetical protein.
 
     0.956
SDW14040.1
Cell division and transport-associated protein TolA.
  
 
 0.946
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.932
SDX65780.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
  
 0.870
SDX63321.1
Hypothetical protein.
 
     0.761
SDX65813.1
Putative hemin transport protein.
 
   
 0.714
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.