Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW16737.1 | SDX67168.1 | SAMN04488001_0444 | SAMN04488001_0170 | Transcriptional regulator, contains XRE-family HTH domain. | Serine/threonine-protein kinase HipA. | 0.445 |
SDW20575.1 | SDX67168.1 | SAMN04488001_0554 | SAMN04488001_0170 | Hypothetical protein. | Serine/threonine-protein kinase HipA. | 0.445 |
SDW32149.1 | SDX67168.1 | SAMN04488001_0845 | SAMN04488001_0170 | Hypothetical protein. | Serine/threonine-protein kinase HipA. | 0.445 |
SDW38735.1 | SDW39147.1 | SAMN04488001_1057 | SAMN04488001_1067 | Transcriptional regulator, XRE family with cupin sensor; Manually curated. | Transcriptional regulator, XRE family with cupin sensor. | 0.621 |
SDW38735.1 | SDX67168.1 | SAMN04488001_1057 | SAMN04488001_0170 | Transcriptional regulator, XRE family with cupin sensor; Manually curated. | Serine/threonine-protein kinase HipA. | 0.516 |
SDW39147.1 | SDW38735.1 | SAMN04488001_1067 | SAMN04488001_1057 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor; Manually curated. | 0.621 |
SDW39147.1 | SDX49110.1 | SAMN04488001_1067 | SAMN04488001_3346 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.527 |
SDW39147.1 | SDX67168.1 | SAMN04488001_1067 | SAMN04488001_0170 | Transcriptional regulator, XRE family with cupin sensor. | Serine/threonine-protein kinase HipA. | 0.445 |
SDX49110.1 | SDW39147.1 | SAMN04488001_3346 | SAMN04488001_1067 | Transcriptional regulator, XRE family with cupin sensor. | Transcriptional regulator, XRE family with cupin sensor. | 0.527 |
SDX49110.1 | SDX67168.1 | SAMN04488001_3346 | SAMN04488001_0170 | Transcriptional regulator, XRE family with cupin sensor. | Serine/threonine-protein kinase HipA. | 0.489 |
SDX60694.1 | SDX67168.1 | SAMN04488001_0005 | SAMN04488001_0170 | Fic family protein. | Serine/threonine-protein kinase HipA. | 0.457 |
SDX67168.1 | SDW16737.1 | SAMN04488001_0170 | SAMN04488001_0444 | Serine/threonine-protein kinase HipA. | Transcriptional regulator, contains XRE-family HTH domain. | 0.445 |
SDX67168.1 | SDW20575.1 | SAMN04488001_0170 | SAMN04488001_0554 | Serine/threonine-protein kinase HipA. | Hypothetical protein. | 0.445 |
SDX67168.1 | SDW32149.1 | SAMN04488001_0170 | SAMN04488001_0845 | Serine/threonine-protein kinase HipA. | Hypothetical protein. | 0.445 |
SDX67168.1 | SDW38735.1 | SAMN04488001_0170 | SAMN04488001_1057 | Serine/threonine-protein kinase HipA. | Transcriptional regulator, XRE family with cupin sensor; Manually curated. | 0.516 |
SDX67168.1 | SDW39147.1 | SAMN04488001_0170 | SAMN04488001_1067 | Serine/threonine-protein kinase HipA. | Transcriptional regulator, XRE family with cupin sensor. | 0.445 |
SDX67168.1 | SDX49110.1 | SAMN04488001_0170 | SAMN04488001_3346 | Serine/threonine-protein kinase HipA. | Transcriptional regulator, XRE family with cupin sensor. | 0.489 |
SDX67168.1 | SDX60694.1 | SAMN04488001_0170 | SAMN04488001_0005 | Serine/threonine-protein kinase HipA. | Fic family protein. | 0.457 |
SDX67168.1 | SDX67200.1 | SAMN04488001_0170 | SAMN04488001_0171 | Serine/threonine-protein kinase HipA. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.984 |
SDX67168.1 | SDX67231.1 | SAMN04488001_0170 | SAMN04488001_0172 | Serine/threonine-protein kinase HipA. | Glutathione S-transferase. | 0.524 |
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