STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW28521.1Alkane 1-monooxygenase. (347 aa)    
Predicted Functional Partners:
SDW93031.1
Alcohol dehydrogenase.
     
 0.699
SDW28487.1
Hypothetical protein.
       0.692
SDX66476.1
Ferredoxin-NADP reductase.
  
 
 0.665
SDX11650.1
Reductive dehalogenase.
  
 
 0.629
SDW34586.1
Hypothetical protein.
  
     0.624
SDW28550.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
  0.595
SDW19339.1
Capsular polysaccharide export protein.
  
     0.585
SDW80123.1
2,4-dienoyl-CoA reductase (NADPH2).
  
   
 0.578
SDW77491.1
Hypothetical protein.
  
     0.576
SDW25011.1
Hint domain-containing protein.
  
     0.552
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.