STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW32628.13-hydroxyisobutyrate dehydrogenase. (299 aa)    
Predicted Functional Partners:
SDW32657.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
    0.877
SDW92087.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
  
 
  0.781
SDW92142.1
Enoyl-CoA hydratase/carnithine racemase.
 
 
 
  0.640
SDW18627.1
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.572
SDW92168.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
  
 
0.562
SDX10168.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
   
 
 0.557
SDX49340.1
Aldehyde dehydrogenase (NAD+).
   
 
  0.521
SDX01492.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.496
SDW81684.1
Acyl-CoA synthetase (NDP forming).
    
  0.495
SDW41972.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
  0.490
Your Current Organism:
Litoreibacter albidus
NCBI taxonomy Id: 670155
Other names: DSM 26922, JCM 16493, KMM 3851, L. albidus, Litoreibacter albidus Romanenko et al. 2011, NRIC 0773, alpha proteobacterium KMM 3851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.